TAP ABI3/VP1 in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

B3
AP2
Auxin_resp
WRKY

(Domain names are clickable)



List of proteins (66)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0050s0013.1.ppacid=28916992 transcript=Cagra.0050s0013.1 locus=Cagra.0050s0013 ID=Cagra.0050s0013.1.v1.1 annot-version=v1.1
Cagra.0120s0003.1.ppacid=28911874 transcript=Cagra.0120s0003.1 locus=Cagra.0120s0003 ID=Cagra.0120s0003.1.v1.1 annot-version=v1.1
Cagra.0239s0041.1.ppacid=28915424 transcript=Cagra.0239s0041.1 locus=Cagra.0239s0041 ID=Cagra.0239s0041.1.v1.1 annot-version=v1.1
Cagra.0410s0005.1.ppacid=28897901 transcript=Cagra.0410s0005.1 locus=Cagra.0410s0005 ID=Cagra.0410s0005.1.v1.1 annot-version=v1.1
Cagra.0483s0046.1.ppacid=28900427 transcript=Cagra.0483s0046.1 locus=Cagra.0483s0046 ID=Cagra.0483s0046.1.v1.1 annot-version=v1.1
Cagra.0567s0011.1.ppacid=28910728 transcript=Cagra.0567s0011.1 locus=Cagra.0567s0011 ID=Cagra.0567s0011.1.v1.1 annot-version=v1.1
Cagra.0612s0056.1.ppacid=28917550 transcript=Cagra.0612s0056.1 locus=Cagra.0612s0056 ID=Cagra.0612s0056.1.v1.1 annot-version=v1.1
Cagra.0701s0007.1.ppacid=28913762 transcript=Cagra.0701s0007.1 locus=Cagra.0701s0007 ID=Cagra.0701s0007.1.v1.1 annot-version=v1.1
Cagra.0701s0008.1.ppacid=28913793 transcript=Cagra.0701s0008.1 locus=Cagra.0701s0008 ID=Cagra.0701s0008.1.v1.1 annot-version=v1.1
Cagra.0751s0002.1.ppacid=28899591 transcript=Cagra.0751s0002.1 locus=Cagra.0751s0002 ID=Cagra.0751s0002.1.v1.1 annot-version=v1.1
Cagra.0824s0035.1.ppacid=28899935 transcript=Cagra.0824s0035.1 locus=Cagra.0824s0035 ID=Cagra.0824s0035.1.v1.1 annot-version=v1.1
Cagra.0844s0024.1.ppacid=28914909 transcript=Cagra.0844s0024.1 locus=Cagra.0844s0024 ID=Cagra.0844s0024.1.v1.1 annot-version=v1.1
Cagra.0891s0022.1.ppacid=28912924 transcript=Cagra.0891s0022.1 locus=Cagra.0891s0022 ID=Cagra.0891s0022.1.v1.1 annot-version=v1.1
Cagra.0906s0005.1.ppacid=28900127 transcript=Cagra.0906s0005.1 locus=Cagra.0906s0005 ID=Cagra.0906s0005.1.v1.1 annot-version=v1.1
Cagra.0993s0119.1.ppacid=28903500 transcript=Cagra.0993s0119.1 locus=Cagra.0993s0119 ID=Cagra.0993s0119.1.v1.1 annot-version=v1.1
Cagra.1036s0073.1.ppacid=28903736 transcript=Cagra.1036s0073.1 locus=Cagra.1036s0073 ID=Cagra.1036s0073.1.v1.1 annot-version=v1.1
Cagra.1085s0083.1.ppacid=28900628 transcript=Cagra.1085s0083.1 locus=Cagra.1085s0083 ID=Cagra.1085s0083.1.v1.1 annot-version=v1.1
Cagra.1150s0033.1.ppacid=28905400 transcript=Cagra.1150s0033.1 locus=Cagra.1150s0033 ID=Cagra.1150s0033.1.v1.1 annot-version=v1.1
Cagra.11546s0001.1.ppacid=28897674 transcript=Cagra.11546s0001.1 locus=Cagra.11546s0001 ID=Cagra.11546s0001.1.v1.1 annot-version=v1.1
Cagra.11786s0007.1.ppacid=28912485 transcript=Cagra.11786s0007.1 locus=Cagra.11786s0007 ID=Cagra.11786s0007.1.v1.1 annot-version=v1.1
Cagra.12385s0007.1.ppacid=28896831 transcript=Cagra.12385s0007.1 locus=Cagra.12385s0007 ID=Cagra.12385s0007.1.v1.1 annot-version=v1.1
Cagra.1317s0003.1.ppacid=28910440 transcript=Cagra.1317s0003.1 locus=Cagra.1317s0003 ID=Cagra.1317s0003.1.v1.1 annot-version=v1.1
Cagra.1317s0004.1.ppacid=28910434 transcript=Cagra.1317s0004.1 locus=Cagra.1317s0004 ID=Cagra.1317s0004.1.v1.1 annot-version=v1.1
Cagra.1364s0005.1.ppacid=28907600 transcript=Cagra.1364s0005.1 locus=Cagra.1364s0005 ID=Cagra.1364s0005.1.v1.1 annot-version=v1.1
Cagra.1424s0002.1.ppacid=28916661 transcript=Cagra.1424s0002.1 locus=Cagra.1424s0002 ID=Cagra.1424s0002.1.v1.1 annot-version=v1.1
Cagra.1424s0003.1.ppacid=28916657 transcript=Cagra.1424s0003.1 locus=Cagra.1424s0003 ID=Cagra.1424s0003.1.v1.1 annot-version=v1.1
Cagra.1424s0005.1.ppacid=28916659 transcript=Cagra.1424s0005.1 locus=Cagra.1424s0005 ID=Cagra.1424s0005.1.v1.1 annot-version=v1.1
Cagra.1424s0006.1.ppacid=28916658 transcript=Cagra.1424s0006.1 locus=Cagra.1424s0006 ID=Cagra.1424s0006.1.v1.1 annot-version=v1.1
Cagra.15158s0004.1.ppacid=28902649 transcript=Cagra.15158s0004.1 locus=Cagra.15158s0004 ID=Cagra.15158s0004.1.v1.1 annot-version=v1.1
Cagra.15158s0006.1.ppacid=28902639 transcript=Cagra.15158s0006.1 locus=Cagra.15158s0006 ID=Cagra.15158s0006.1.v1.1 annot-version=v1.1
Cagra.15158s0010.1.ppacid=28902648 transcript=Cagra.15158s0010.1 locus=Cagra.15158s0010 ID=Cagra.15158s0010.1.v1.1 annot-version=v1.1
Cagra.1626s0014.1.ppacid=28904438 transcript=Cagra.1626s0014.1 locus=Cagra.1626s0014 ID=Cagra.1626s0014.1.v1.1 annot-version=v1.1
Cagra.1655s0012.1.ppacid=28902926 transcript=Cagra.1655s0012.1 locus=Cagra.1655s0012 ID=Cagra.1655s0012.1.v1.1 annot-version=v1.1
Cagra.1655s0062.1.ppacid=28902871 transcript=Cagra.1655s0062.1 locus=Cagra.1655s0062 ID=Cagra.1655s0062.1.v1.1 annot-version=v1.1
Cagra.17254s0001.1.ppacid=28918094 transcript=Cagra.17254s0001.1 locus=Cagra.17254s0001 ID=Cagra.17254s0001.1.v1.1 annot-version=v1.1
Cagra.1822s0032.1.ppacid=28905109 transcript=Cagra.1822s0032.1 locus=Cagra.1822s0032 ID=Cagra.1822s0032.1.v1.1 annot-version=v1.1
Cagra.1841s0002.1.ppacid=28901934 transcript=Cagra.1841s0002.1 locus=Cagra.1841s0002 ID=Cagra.1841s0002.1.v1.1 annot-version=v1.1
Cagra.1968s0048.1.ppacid=28910060 transcript=Cagra.1968s0048.1 locus=Cagra.1968s0048 ID=Cagra.1968s0048.1.v1.1 annot-version=v1.1
Cagra.2007s0005.1.ppacid=28908652 transcript=Cagra.2007s0005.1 locus=Cagra.2007s0005 ID=Cagra.2007s0005.1.v1.1 annot-version=v1.1
Cagra.2093s0004.1.ppacid=28899559 transcript=Cagra.2093s0004.1 locus=Cagra.2093s0004 ID=Cagra.2093s0004.1.v1.1 annot-version=v1.1
Cagra.2117s0038.1.ppacid=28905547 transcript=Cagra.2117s0038.1 locus=Cagra.2117s0038 ID=Cagra.2117s0038.1.v1.1 annot-version=v1.1
Cagra.21772s0001.1.ppacid=28918792 transcript=Cagra.21772s0001.1 locus=Cagra.21772s0001 ID=Cagra.21772s0001.1.v1.1 annot-version=v1.1
Cagra.22230s0001.1.ppacid=28900176 transcript=Cagra.22230s0001.1 locus=Cagra.22230s0001 ID=Cagra.22230s0001.1.v1.1 annot-version=v1.1
Cagra.2329s0005.1.ppacid=28913053 transcript=Cagra.2329s0005.1 locus=Cagra.2329s0005 ID=Cagra.2329s0005.1.v1.1 annot-version=v1.1
Cagra.23502s0003.1.ppacid=28894489 transcript=Cagra.23502s0003.1 locus=Cagra.23502s0003 ID=Cagra.23502s0003.1.v1.1 annot-version=v1.1
Cagra.2520s0001.1.ppacid=28915976 transcript=Cagra.2520s0001.1 locus=Cagra.2520s0001 ID=Cagra.2520s0001.1.v1.1 annot-version=v1.1
Cagra.2774s0002.1.ppacid=28894137 transcript=Cagra.2774s0002.1 locus=Cagra.2774s0002 ID=Cagra.2774s0002.1.v1.1 annot-version=v1.1
Cagra.27859s0001.1.ppacid=28913098 transcript=Cagra.27859s0001.1 locus=Cagra.27859s0001 ID=Cagra.27859s0001.1.v1.1 annot-version=v1.1
Cagra.2848s0054.1.ppacid=28919611 transcript=Cagra.2848s0054.1 locus=Cagra.2848s0054 ID=Cagra.2848s0054.1.v1.1 annot-version=v1.1
Cagra.3519s0007.1.ppacid=28893897 transcript=Cagra.3519s0007.1 locus=Cagra.3519s0007 ID=Cagra.3519s0007.1.v1.1 annot-version=v1.1
Cagra.3793s0014.1.ppacid=28911181 transcript=Cagra.3793s0014.1 locus=Cagra.3793s0014 ID=Cagra.3793s0014.1.v1.1 annot-version=v1.1
Cagra.3807s0032.1.ppacid=28899170 transcript=Cagra.3807s0032.1 locus=Cagra.3807s0032 ID=Cagra.3807s0032.1.v1.1 annot-version=v1.1
Cagra.3807s0033.1.ppacid=28899155 transcript=Cagra.3807s0033.1 locus=Cagra.3807s0033 ID=Cagra.3807s0033.1.v1.1 annot-version=v1.1
Cagra.3807s0034.1.ppacid=28899177 transcript=Cagra.3807s0034.1 locus=Cagra.3807s0034 ID=Cagra.3807s0034.1.v1.1 annot-version=v1.1
Cagra.3807s0035.1.ppacid=28899164 transcript=Cagra.3807s0035.1 locus=Cagra.3807s0035 ID=Cagra.3807s0035.1.v1.1 annot-version=v1.1
Cagra.3807s0037.1.ppacid=28899200 transcript=Cagra.3807s0037.1 locus=Cagra.3807s0037 ID=Cagra.3807s0037.1.v1.1 annot-version=v1.1
Cagra.3807s0040.1.ppacid=28899151 transcript=Cagra.3807s0040.1 locus=Cagra.3807s0040 ID=Cagra.3807s0040.1.v1.1 annot-version=v1.1
Cagra.3807s0041.1.ppacid=28899176 transcript=Cagra.3807s0041.1 locus=Cagra.3807s0041 ID=Cagra.3807s0041.1.v1.1 annot-version=v1.1
Cagra.4084s0003.1.ppacid=28905233 transcript=Cagra.4084s0003.1 locus=Cagra.4084s0003 ID=Cagra.4084s0003.1.v1.1 annot-version=v1.1
Cagra.4396s0008.1.ppacid=28918025 transcript=Cagra.4396s0008.1 locus=Cagra.4396s0008 ID=Cagra.4396s0008.1.v1.1 annot-version=v1.1
Cagra.5105s0003.1.ppacid=28905329 transcript=Cagra.5105s0003.1 locus=Cagra.5105s0003 ID=Cagra.5105s0003.1.v1.1 annot-version=v1.1
Cagra.5105s0005.1.ppacid=28905328 transcript=Cagra.5105s0005.1 locus=Cagra.5105s0005 ID=Cagra.5105s0005.1.v1.1 annot-version=v1.1
Cagra.5742s0010.1.ppacid=28905222 transcript=Cagra.5742s0010.1 locus=Cagra.5742s0010 ID=Cagra.5742s0010.1.v1.1 annot-version=v1.1
Cagra.6254s0043.1.ppacid=28897601 transcript=Cagra.6254s0043.1 locus=Cagra.6254s0043 ID=Cagra.6254s0043.1.v1.1 annot-version=v1.1
Cagra.6493s0001.1.ppacid=28898203 transcript=Cagra.6493s0001.1 locus=Cagra.6493s0001 ID=Cagra.6493s0001.1.v1.1 annot-version=v1.1
Cagra.6777s0013.1.ppacid=28894345 transcript=Cagra.6777s0013.1 locus=Cagra.6777s0013 ID=Cagra.6777s0013.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum